Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAAQTDYKKQVVGILLSLAFVLFVFSFSERHEKPLVEGKKQENWHTVVDKASVKIYGSRLVEENKLKQKLGHKQADSILTLLKLANEKHITL
5BWA Chain:B ((59-100))----------------------------------------RINWRTVLSGGSLYIEIPGG----AL--PEGSKD--SFAVLLEFAEEQ----


General information:
TITO was launched using:
RESULT:

Template: 5BWA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 78 -9968 -127.79 -249.20
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain B : 0.62

3D Compatibility (PKB) : -127.79
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.444

(partial model without unconserved sides chains):
PDB file : Tito_5BWA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5BWA-query.scw
PDB file : Tito_Scwrl_5BWA.pdb: