Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTHSFAVPRSVEWKETAITILNQQKLPDETEYLELTTKEDVFDAIVTLKVRGAPAIGITAAFGLALA----AKDIETDNVTEFRRRLEDIKQYLNSSRPTAINLSWALERLSHSVEN------AISVNEAKTNLVHEAIQIQVEDEETCRLIGQNALQLFKKGD-----RIMTICNAGSIATSRYGTALAP----FYLAKQKDLGLHIYACETRPVLQGSRLTAWELMQGGIDVTLITDSMAAHTMKEKQISAVIVGADRIAKNGDTANKIGTYGLAILANAFDIPFFVAAPLSTFDTKVKCGADIPIEERDPEEVRQ--ISGVRTAPS--NVPVFNPAFDITPHDLIS-GIITEKGIMTGNYEEEIEQLFKGEKVH
2A0U Chain:A ((20-364))---------SIKYTPGSLRLLDQRKLPLETVFDDVLTVEDIWSAIKEMRVRGAPAIAVSAALGIAVATQRKAANGELKSGREVQTFLLTSCDFVMTSRPTAVNLFNCLRDLKAQVDKLDPTKAAAEVAQAFVELAEAVYTNDVAFNEGIMRHGAAHILAAAKAEGRDKVSILTICNTGALATSRYGTALGVVRQLFYDGKLE----RVYACETRPWNQGARLTVYECVQEDIPCTLICDGAASSLMLNRKIDAVVVGADRICQNGDTANKIGTYNLAVSAKFHGVKLYVAAPTTTLDVKTASGNHVEIEEREPTEITTNLVTKQRVVADGPHLSIWNPVFDITPSELITGGIITEKGV-------------------


General information:
TITO was launched using:
RESULT:

Template: 2A0U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1835 -169335 -92.28 -527.52
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.79

3D Compatibility (PKB) : -92.28
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.499

(partial model without unconserved sides chains):
PDB file : Tito_2A0U.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2A0U-query.scw
PDB file : Tito_Scwrl_2A0U.pdb: