Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKGKIPKIRNQANKVKRTPRYMEFPVTYEVYHVESGDTLWTIAKSFEIPVQQLMNLNKL-SSDRIYPGQIIKIRER
5C8Q Chain:B ((63-103))--------------------------------VQQGDTLRDIGRRFDCDFHEIARRNNIQNEDLIYPGQVLQV---


General information:
TITO was launched using:
RESULT:

Template: 5C8Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 111 -26337 -237.27 -658.43
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain B : 0.72

3D Compatibility (PKB) : -237.27
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.687

(partial model without unconserved sides chains):
PDB file : Tito_5C8Q.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5C8Q-query.scw
PDB file : Tito_Scwrl_5C8Q.pdb: