Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMADSFLFYNLSEAQMTFQDVMERLKAFVQKDPRSSYVLSIGTDSQVYRDYTKFITALHLHRTGKGAWGCLKNHTVDRPIHSLREKISLETAYSQETAAHILDGHLMDITDLLLPFTGEGADLTFEVHLDIGKKGLTKDLIQEMTGRITSMGIEAKIKPDSYTAFSYANRFTK
4CF4 Chain:A ((51-108))---------------------------------------------------------------------------------------------------ILYSQTLTLTGLYRPF-GEIAAAVFEMVAANHQAKVTPDDIAELKTRLTSMPAYPDVAP--------------


General information:
TITO was launched using:
RESULT:

Template: 4CF4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 96 -12276 -127.87 -211.65
target 2D structure prediction score : 0.45
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : -127.87
2D Compatibility (Sec. Struct. Predict.) : 0.45
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.141

(partial model without unconserved sides chains):
PDB file : Tito_4CF4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4CF4-query.scw
PDB file : Tito_Scwrl_4CF4.pdb: