Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAVKKVVTHPAEVLETPAETVTVFDKKLKKLLDDMYDTMLEMDGVGLAAPQIGILKRAAVVEIGDDRG-RIDLVNPEILEKSGEQTGI-EGCLSFPNVYGDVTRADYVKVRAFNRQGKPFILEARGFLARAVQHEMDHLDGVLFTSKISKYYTEDELADMEG
2W3U Chain:A ((1-147))-SVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDERLVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLS-------------


General information:
TITO was launched using:
RESULT:

Template: 2W3U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 736 -69749 -94.77 -481.03
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain A : 0.82

3D Compatibility (PKB) : -94.77
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.511

(partial model without unconserved sides chains):
PDB file : Tito_2W3U.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2W3U-query.scw
PDB file : Tito_Scwrl_2W3U.pdb: