Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSTIELNKRQEHILQIVKENGPITGEHIAEKLNLTRATLRPDLAILTMSGFLEARPRVGYFYTGKTGTQLLADKLKKLQVKDFQSIPVVIHENVSVYDAICTMFLEDVGTLFVVDRDAVLVGVLSRKDLLRASIGQ-QELTSVPVHIIMTR-MPNITVCRREDY-VMDIAKHLIEKQIDALPVIKDTDKGFEVIGRVTKTNMTKILVSLSENEIL
2QH1 Chain:A ((20-154))-----------------------------------------------------------HMFM----------RVEKIMNSNFKTV----NWNTTVFDAVKIMNENHLYGLVVKDDNGNDVGLLSERSIIKRFIPRNKKPDEVPIRLVMRKPIPKV----KSDYDVKDVAAYLSENGLERCAVVDDPGR---VVGIVTLTDLSRYLSRASITDIL


General information:
TITO was launched using:
RESULT:

Template: 2QH1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 604 -22346 -37.00 -169.29
target 2D structure prediction score : 0.45
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -37.00
2D Compatibility (Sec. Struct. Predict.) : 0.45
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.554

(partial model without unconserved sides chains):
PDB file : Tito_2QH1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2QH1-query.scw
PDB file : Tito_Scwrl_2QH1.pdb: