Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKTKKQQYVTIKGTKNGLTLHLDDACSFDELLDGLQNMLSIEQYTDGK-GQKISVHVKLGNRFLYKEQEEQLTELIASKKDLFVHSIDSEVITKKE--AQQIREEAEIISVSKIVRSGQVLQVKGDLLLIGDVNPGGTVRAGGNIFVLGSLKGIAHAGFNGNNQAVIAASEMLPTQLRINHVLNRSPDHIQKGNEMECAYLDTDGNMVIERLQHLAHLRPDLTRLEGGM
1HF2 Chain:A ((1-206))-------MVDFKMTKEGLVLLIKDYQNLEEVLNAISARITQMG-GFFAKGD--RISLMIENHNKHSQDIPRIVSHLRNLG-LEVSQILVG------KVQSRTTVESTGKVIKRNIRSGQTVVHSGDVIVFGNVNKGAEILAGGSVVVFGKAQGNIRAGLNEGGQAVVAALDLQTSLIQIAGFITHSKGEE---NVPSIAHVKG-NRIVIEPFDKVSF------------


General information:
TITO was launched using:
RESULT:

Template: 1HF2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1053 -2505 -2.38 -12.98
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -2.38
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.427

(partial model without unconserved sides chains):
PDB file : Tito_1HF2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1HF2-query.scw
PDB file : Tito_Scwrl_1HF2.pdb: