Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMNQSKQLVRLI-EIAIMTAAAVILDIVSGMFLSMPQGGSVSIMMIPIFLISFRWGVKAGLTTGLLTGLVQIAIGNLFAQHPVQLLLDYIVAFAAIGISGCFASSVRKAAVSKTKGKLIVSVVSAVFIGSLLRYAAHVISGAVFFGSFAPKGTPVWIYSLTYNATYMVPSFIICAIVLCLLFMTAPRLLKSDKA
4POP Chain:A ((16-186))-----FNVRLLTEIAFMAALAFIISLIPN---TVYGWIIVEIACIPILLLSLRRGLTAGLVGGLIWGILSMITGHAYILSLSQAFLEYLVAPVSLGIAGLFR--------QKTAPLKLAPVLLGTFVAVLLKYFFHFIAGIIFWSQYAWKGWGAVAYSLAVNGISGILTAIAAFVILIIFVKKFPKL------


General information:
TITO was launched using:
RESULT:

Template: 4POP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 753 -158740 -210.81 -933.76
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : -210.81
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.373

(partial model without unconserved sides chains):
PDB file : Tito_4POP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4POP-query.scw
PDB file : Tito_Scwrl_4POP.pdb: