Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSENEQFSQMEAKARARMKERGVEVSDIAELVFFLQKKYHPDLTIDECTLNVNRVLAKREVQNAILTGIELDVLAEQKKLSEPLQTM--------LEIDESLYGVDEVLAFSIVNIYGSIGFTNYGYIDKEKPGILKRLNDKSTGECHTFLDDIVGAISAAASSRLAHRARHTE
3EA5 Chain:B ((540-649))----------------------------ASISTFVMDKLGQTMSVDENQLTLEDAQSLQELQSNILTVLAA-VIRKSPSSVEPVADMLMGLFFRLLEKKDSAFIEDDVF-YAISALAASLGKGFEKYLETFSPYLLKALN----------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3EA5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 306 -34046 -111.26 -333.78
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain B : 0.67

3D Compatibility (PKB) : -111.26
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.295

(partial model without unconserved sides chains):
PDB file : Tito_3EA5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3EA5-query.scw
PDB file : Tito_Scwrl_3EA5.pdb: