Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQGYDVAK
3CJK Chain:B ((5-66))----TISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFD---


General information:
TITO was launched using:
RESULT:

Template: 3CJK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 229 -49191 -214.81 -793.40
target 2D structure prediction score : 0.85
Monomeric hydrophicity matching model chain B : 0.80

3D Compatibility (PKB) : -214.81
2D Compatibility (Sec. Struct. Predict.) : 0.85
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.675

(partial model without unconserved sides chains):
PDB file : Tito_3CJK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3CJK-query.scw
PDB file : Tito_Scwrl_3CJK.pdb: