Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMITESRQMLDKRNRPLRDLRISVTDRCNFRCTYCMPAELFGPDYPFLKKEELLSFEELERLATLFVTRF-GVEKIRLTGGEP-LMRKDMPELIKKLARIPGIRDI----AMTTNGSLL-PVYAKRLKEAGLKRVTISLDS-LEDERFKKINGRGV-SVSKVLEGIEAAKQAGLGVKINMVVQKGVNEKDILPMARYFKEKGHILRFIEFMDVGNTNQWEKKDVMTKAEIIDLINKHMPVEPIAPNYIGEVASRFRYLDGSGEIGVISSVSDAFCGSCNRARLSARGELFTCLFASSGFDLRAPVRQELSDDELSEMIGTVWKNRIDQYSVDRTLSKASGKKKVEMSYIGG
4K38 Chain:A ((3-194))--------------PLSLLIKPASSGCNLKCTYCFYHSL--SDNRNVKSYGIMRDEVLESMVKRVLNEANGHCSFAFQGGEPTLAGLEFFEKLMELQRKHNYKNLKIYNSLQTNGTLIDESWAKFLSENKF-LVGLSMDGPKEIHNLNRKDCCGLDTFSKVERAAELFKKYKVEFNILCVVTSNT-ARHVNKVYKYFKEKD--FKFLQFINC------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4K38.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 851 5160 6.06 28.19
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : 6.06
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.399

(partial model without unconserved sides chains):
PDB file : Tito_4K38.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4K38-query.scw
PDB file : Tito_Scwrl_4K38.pdb: