Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKRTAFVMGASQGIGKAIALKLADQHFSLVIN-SRNLDNIESVKEDILAKHPEASVIVLAGDMSDQHTRAGIFQKIESQCGRLDVLINNIPGGAPDTFDNCNI----EDMTATFTQKTVAYIDAIKRASSLMKQNEFGRIINI------VGNLWKEPGANMFTNSMMNAALINASKNISIQLAPHNITVNCLNPGFIATDRYHQFVENVMKKNSISKQKAEEQIASGIPMKRVGSAEETAALAAFLASEEASYITGQQISADGGSMKSI
3SJ7 Chain:A ((11-249))---KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAI--QANVADADEVKAMIKEVVSQFGSLDVLVNN----AGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGN----PGQANYVAT--KAGVIGLTKSAARELASRGITVNAVAPGFIVSDMT----DEL-----------KEQMLTQIPLARFGQDTDIANTVAFLASDKAKYITGQTIHVNGG-----


General information:
TITO was launched using:
RESULT:

Template: 3SJ7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1198 -631 -0.53 -2.81
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : -0.53
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.581

(partial model without unconserved sides chains):
PDB file : Tito_3SJ7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3SJ7-query.scw
PDB file : Tito_Scwrl_3SJ7.pdb: