Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNLTDKTVLITGGASGIGYAAVQAFLNQQANVVVADIDEAQGEAMIRKENNDRLHFVHTDITDEPACQNAIRSAVDKFGGLDVLINNAGIEIVAPIHEMELSNWNKVLNVNLTGMFLMSKHALKYMLKSGKGNIINTCSVGGVVAWPDIPAYNASKGGVLQLTRSMAVDYAKHNIRVNCVCPGIIDTPLNEKSF---LENNEGTLEEIKKEKAKVNPLLRLGKPEEIANVMLFLASDLSSYMTGSAITADGGYTAQ
3VTZ Chain:A ((4-248))--FTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDE---------DVNVSDHF-KIDVTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYAP-KIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVVAFLASDRSSFITGACLTVDGGLLSK


General information:
TITO was launched using:
RESULT:

Template: 3VTZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1313 -114481 -87.19 -477.00
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.82

3D Compatibility (PKB) : -87.19
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.457

(partial model without unconserved sides chains):
PDB file : Tito_3VTZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3VTZ-query.scw
PDB file : Tito_Scwrl_3VTZ.pdb: