Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSAVTESVLESIISPVTMSEFLEEYWPVKPLVARGEVERFTSIPGFEKVRTLENVLAIYNNPVMVVGDAVIEESEGITDRFLVSPAEALEWYEKGAALEFDFTDLFIPQVRRWIEKLKAELRLPAGTSSKAIVYAAKNGGGFKAHFDAYTNLIFQIQGEKTWKLAKNENVSNPMQHYDLSEAPYYP-DDLQSYWKGDPPKEDLPDAEIVNLTPGTMLYLPRGLWHSTKSDQATLALNI---TFGQPAWLDLMLAALRKKLISDNRFRELAVNHQSLHESSKSELNGYLESLIQTLSENAETLTPEQIFQSQDSDFDPYQSTQLVFRQLLTSYKF
4CCM Chain:A ((102-256))------------------------------------------------------------------------------------PAAAWSLYQAGCSLRLLCPQAFSTTVWQFLAVLQEQFGSMAGSN---VYLTPPNSQGFAPHYDDIEAFVLQLEGRKLWRVYRPR---VPTEELALTSSPNFSQDDL-----GEPVLQTV-------LEPGDLLYFPRGFIHQAECQDGVHSLHLTLSTYQRNTWGDFLEAIL------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4CCM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 669 -22373 -33.44 -149.15
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -33.44
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.483

(partial model without unconserved sides chains):
PDB file : Tito_4CCM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4CCM-query.scw
PDB file : Tito_Scwrl_4CCM.pdb: