Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTGSVDRPDQNRGERSMKSPGLDLVRRTLDEARAAARARGQDAGRGRVASVASGRVAGRRRSWSGPGPDIRDPQPLGKAARELAKKRGWSVRVAEGMVLGQWSAVVGHQIAEHARPTALNDGVLSVIAESTAWATQLR-IMQAQLLAKIAAAVGNDVVRSLKITGPAAPSWRKGPRHIAGRGPRDTYG |
5FKV Chain:E ((537-583)) | -----------------------------------------------------------------------------------------------------------EQVALNAWKEE-SDNAVCLHLRS-SQRHLNNRGAQQKLAEALSMLKGST-------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5FKV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -18417 for 227 contacts (-81.1/contact) +
2D Compatibility (PS) -5036 + (NN) -1012 + (LL) 6160
1D Compatibility (HY) 1200 + (ID) 400
Total energy: -17505.0 ( -77.11 by residue)
QMean score : 0.189
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