Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQQTAWAPRTSGIAGCGAGGVVMAIASVTLVTDT-PGRVLTGVAALGLILFASATWRARPRLAITPDGLAIRGWFRTQLLRHSNIKIIRIDEFRRYGRLVRLLEIETVSGGLLILSRWDLGTDPVEVLDALTAAGYAGRGQR
3IFR Chain:A ((241-288))
------------------GGAADHIASALAAGITRPGDVLLKFGGAGDIIVASATAKSDPRL--------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3IFR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13264 for 192 contacts (-69.1/contact) +
2D Compatibility (PS) -4538 + (NN) -1374 + (LL) 6848
1D Compatibility (HY) 400 + (ID) 950
Total energy: -12878.0 ( -67.07 by residue)
QMean score : -0.017
(partial model without unconserved sides chains):
PDB file :
Tito_3IFR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IFR-query.scw
PDB file :
Tito_Scwrl_3IFR.pdb
: