Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEQAGSSVAVIQERQALLARQHDAVAEADRELADVLASAHAAMRESVRRLDAIAAELDRAVPDQDQLAVDTPMGAREFQTFLVAKQREIVAVVAAAHELDRAKSAVLKRLRAQYTEPAR
3H4M Chain:A ((105-148))
LAKEKAPSIIFIDEIDAIAAKRTDALTGGDREVQRTLMQLLAEM----------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3H4M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7383 for 184 contacts (-40.1/contact) +
2D Compatibility (PS) -4521 + (NN) -990 + (LL) 7412
1D Compatibility (HY) -2800 + (ID) 650
Total energy: -8932.0 ( -48.54 by residue)
QMean score : 0.389
(partial model without unconserved sides chains):
PDB file :
Tito_3H4M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3H4M-query.scw
PDB file :
Tito_Scwrl_3H4M.pdb
: