Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDRIHVQPAHLRQAAAHHQQTADYLRTVPSSHDAIRESLDSLGPIFSELRDTGRELLELRKQCYQQQADNHADIAQNLRTSAAMWEQHERAASRSLGNIIDGSR
3RQF Chain:A ((129-178))
------------------------FLQTIKDIASAIKELLDTVNNVFKKYQYQNRRALEHQKKEFVKYSKSFSD-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3RQF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -575 for 220 contacts (-2.6/contact) +
2D Compatibility (PS) -5251 + (NN) 190 + (LL) 4468
1D Compatibility (HY) -3200 + (ID) 650
Total energy: -5018.0 ( -22.81 by residue)
QMean score : 0.416
(partial model without unconserved sides chains):
PDB file :
Tito_3RQF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RQF-query.scw
PDB file :
Tito_Scwrl_3RQF.pdb
: