Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAIFGRWSARQRLRRATRESLTIPTFSSSLDCTTRVIGGLWPAELSSNTAETATLAEHLKADLHRIVGSANDELMVIWRAGMADSTRRAEEDRVIDRARASAMRRVESAMRELRQITGRVPVEIPRMRGAGGSDLDTTRLMPAVTVVQPADQACTDWPVAAAEDDEARLQRLLAFVARQEPRLNWAVGVHADGTTVLVTDVAHGWIPPGIALPEGVRLLAPARRAGRAPELVGITTCCKTYTPGDSLRRAVDSTAPTSSVQPRALPAIAGLSVELGIATQRHDGLPKIVHAMATAAGNGAAAEEVDLLRVHVDTALHHVLAQYPRVDPALLLNCMLLAATERSVTGDPIAANYHFAWFRELDSRR |
1J56 Chain:A ((23-80)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LAGAGLTCTTFENGNEVLAALASKTPDVLLSDIRMPGMDGLAL-LKQIKQRHPMLPVII---------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1J56.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -11967 for 360 contacts (-33.2/contact) +
2D Compatibility (PS) -6162 + (NN) -2272 + (LL) 23584
1D Compatibility (HY) -4000 + (ID) 900
Total energy: -1717.0 ( -4.77 by residue)
QMean score : 0.050
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