Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIQIARTWRVFAGGMATGFIGVVLVTAGKASADPLLPPPPIPAPVSAPATVPPVQNLTALPGGSSNRFSPAPAPAPIASPIPVGAPGSTAVPPLPPPVTPAISGTLRDHLREKGVKLEAQRPHGFKALDITLPMPPRWTQVPDPNV-PDAFVVIADRLGNSVYTSNAQLVVYRLIGDFDPAEA------ITHGYIDSQ----KLLAWQTTNASMANFDGFPSSIIEGTYREND-MTLNTSRRHVIATSGADKYLVSLSVTTALSQAVTDGPATDAIVNGFQVVAHAAPAQAPAPAPGSAPVGLPGQAPGYPPAGTLTPVPPR |
| 2LNJ Chain:A ((39-188)) | ------------------------------------------------------------------------------------------------------------------------------KDGYEFLYPNGWIGVDVKGASPGVDVVFRDLI---ERDENLSVIISEIPSDKTLTDLGTATDVGYRFMKTVNDASQGDRQAELINAEARDEDGQVYYTLEYRVLVGDNVERHDLA--SVTTNRGKLITFDL--STAEDRWDTVKSLFDTVASSFHVY--------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LNJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -50097 for 909 contacts (-55.1/contact) +
2D Compatibility (PS) -14342 + (NN) -2018 + (LL) 4860
1D Compatibility (HY) -800 + (ID) 1150
Total energy: -63547.0 ( -69.91 by residue)
QMean score : 0.313
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