Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRPYEIMVILDPTLDERTVAPSLETFLNVVRKDGGKVEKVDIWGKRRLAYEIAKHAEGIYVVIDVKAAPATVSELDRQLSLNESVLRTKVMRTDKH
4ADV Chain:F ((1-94))
MRHYEIVFMVHPDQSEQ-VPGMIERYTAAITGAEGKIHRLEDWGRRQLAYPINKLHKAHYVLMNVEAPQEVIDELETTFRFNDAVIRSMVMRT-KH
General information:
TITO was launched using:
RESULT:
Template:
4ADV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58744 for 634 contacts (-92.7/contact) +
2D Compatibility (PS) -9864 + (NN) -1218 + (LL) -24
1D Compatibility (HY) -10000 + (ID) 1700
Total energy: -81550.0 ( -128.63 by residue)
QMean score : 0.547
(partial model without unconserved sides chains):
PDB file :
Tito_4ADV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ADV-query.scw
PDB file :
Tito_Scwrl_4ADV.pdb
: