Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAGDTTITIVGNLTADPELRFTPSGAAVANFTVASTPRIYDRQTGEWKDGEALFLRCNIWREAAENVAESLTRGARVIVSGRLKQRSFETREGEKRTVIEVEVDEIGPSLRYATAKVNKASRSGGFGSGSRPAPAQTSSASGDDPWGSAPASGSFGGGDDEPPF
1X3E Chain:A ((3-120))
--GDTTITVVGNLTADPELRFTPSGAAVANFTVASTPRM------EWKDGEALFLRCNIWREAAENVAESLTRGSRVIVTGRLKQRSFETRE--KRTVVEVEVDEIGPSLRYATAKVNKA--------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1X3E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53770 for 681 contacts (-79.0/contact) +
2D Compatibility (PS) -11667 + (NN) -2504 + (LL) -996
1D Compatibility (HY) -12800 + (ID) 5250
Total energy: -86987.0 ( -127.73 by residue)
QMean score : 0.525
(partial model without unconserved sides chains):
PDB file :
Tito_1X3E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1X3E-query.scw
PDB file :
Tito_Scwrl_1X3E.pdb
: