Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPVVTAVGRRRGFAMPWVSTARSGAVMLANYSAGVCGRVSSPGLNVRKMCLKANTPGAVTWLDTPKRFLSTQTASRCMAVNSSDVVTGRIDPQVLHTPLNTDVDGYAHAMHSSINSGPLEYLPATFSVFPALGDVGDLGGGVGAATYALDRLSNMRSGACVGGGESPWRSLMT |
3P9C Chain:A ((196-221)) | -----------------------------------------------------------------------------------------------------------------------------YHGFEGLGTLVDVGGGVGATVAAIAA---------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3P9C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -4287 for 103 contacts (-41.6/contact) +
2D Compatibility (PS) -2811 + (NN) -657 + (LL) 7436
1D Compatibility (HY) -2000 + (ID) 550
Total energy: -2869.0 ( -27.85 by residue)
QMean score : -0.026
|
|
|