Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRRTGQRWRGTLPGRRPWTRPAPATCRRHLAFVELRHYFARVMSSAIGSVARWIVPLLGVAAVASIGVIADPVRVVRAPALILVDAANPLAGKPFYVDP-ASAAMVAARNANPPNAELTS--VANTPQSYWLDQAFPPATVGGTVARYTGAAQAAGAMPVLTLYGIPHRDCGSYASGGFATGTDYRGWIDAVASGLGSSPATIIVEPDALAMADCLSPDQRQERFDLVRYAVDTLTRDPAAA-VYVDAGHSRWLSAEAMAARLNDVGVGR-ARGFSLNVSNFYTTDEEIGYGEAI-SGLTNGS-HYVIDTSRNGAGPAPDAPLNWCNPSGRALGAPPTTATAGAHADAYLWIKRPGESDGTCGRGEPQAGRFVSQYAIDLAHNAGQ |
| 2BOG Chain:X ((3-283)) | ---------------------------------------------------------------------------------------------SPFYVNPNMSSAEWVRNNPNDPRTPVIRDRIASVPQGTWFAH-HNPGQITGQVDALMSAAQAAGKIPILVVSNAPGRDCG------APSHSAYRSWIDEFAAGLKNRPAYIIVEPDLISLMSSCMQHVQQEVLETMAYAGKALKAGSSQARIYFDAGHSAWHSPAQMASWLQQADISNSAHGIATNTSNYRWTADEVAYAKAVLSAIGNPSLRAVIDTSRNGNGPAGN---EWCDPSGRAIGTPSTTNTGDPMIDAFLWIKLPGEADG-CIAG---AGQFVPQAAYEMA----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BOG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131449 for 2326 contacts (-56.5/contact) +
2D Compatibility (PS) -29051 + (NN) -15813 + (LL) 7652
1D Compatibility (HY) -16800 + (ID) 5900
Total energy: -191361.0 ( -82.27 by residue)
QMean score : 0.566
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