Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSSITVSVDPVDPVDPVDPVDPVDAVVAAGSDGLTVARIESEIGALEFLNELRTELKSGQFRPQPVRERKIPKPGGLGKVRRLGIPTVADRVVQAALKLVLEPIFETD--F-EPVSYGFRPARRAHDTIAEIHLFGTQEYRWVLDADIKACFDRIDHADLMDRVRHRIK-----DKRVLRLVNWQRIRH-RWNWTDVRRWLTDPTGR-WHPISADGITLFNPAAVPIRRYRYRGNTIPTPWTQAV |
4NYZ Chain:A ((172-304)) | ------------------------------------------------------------------------------KTRIVDVPPFEHCILGRQLLGKFASKFQTQPGLELGSAIGCDPDVH----WTAFGVAMQ-GFERVYDVDYSNFDSTHSVAVFRLLAEEFFSEENGFDPLVKDYLESLAISKHAYEEKRYLITGGLPSGCAATSML-NTI---------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NYZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9218 for 696 contacts (-13.2/contact) +
2D Compatibility (PS) -12949 + (NN) -5257 + (LL) 5780
1D Compatibility (HY) -4800 + (ID) 900
Total energy: -27344.0 ( -39.29 by residue)
QMean score : 0.082
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