Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGDLSISQVSARPGRIGIRARQMFDGYRFQRGPVLVVVEDGRISAV--DFAGSACPDMNLVDLGESTLLPGLVDAHAHLCWDPDGRPEDLAGDPHAVL--VGRARRHAAAALRSGITTIRDLGDRDYAALALREEYRQKTTVGPELVVSGPPLTRSGGH-CWFLGGVADSVEELVDAVQERAARGADWIKVMATGGFVTTASDPWQPQYGSGQLAAVVAAAEQVGLPVTAHAHATAGIAAAVAAGVDGIEHCTFLSE---GSAAASPDVVEA------IVAQGV---WCGMTIPRVYPEMPENLVAVVQDGWRNIRRLIDAGARVALSTDAGVAPGRRHDVLPDDLVYLSRHGFTSTEVLTGATAAAAASCGLGHRKGRIAPGYDADLLAVAAG-------VDHDPAGLCDVKAVWRSGTQVPLQASAVGYNTPS |
| 2P9B Chain:A ((32-436)) | ------------------------------RNMTIVVGADGRIEQVAPSIETSIPAEYHYLDGTGKIVMPGLINAHTHLFS-----------------YMAATVKHNATTLLESGVTTIRTLGDVGYEVVTLRDQIDAGQILGPRILASGPLMAIPEGHGAPLIALTSGTPEEARTAVAQNLKAGVNAIKIAATGG-VTDAQEI---QMSVEQMRAICDEAHQYGVIVGAHAQSPEGVRRSLLAGVDTIEHGSVLDDELIGMFRHNPNALRGYSALIPTLSAGLPLTLLGQDVTGITDIQLENSKNVVGGMVSGARQAHEAGLMIGVGTDTGMTFVPQYATWRELELLVAYAGFSPAEALHAATAVNASILGVDAETGSLEVGKSADLLVLNANPLDDLRALEHPALVIAAGHPVWRPGPK-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2P9B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -26237 for 2789 contacts (-9.4/contact) +
2D Compatibility (PS) -34899 + (NN) 892 + (LL) 3284
1D Compatibility (HY) 18400 + (ID) 1100
Total energy: -39660.0 ( -14.22 by residue)
QMean score : 0.148
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