Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQDSIFNLLTEEQLRGRNTLKWNYFGPDVVPLWLAEMDFPTAPAVLDGVRACVDNEEFGYPPLGEDSLPRATADWCRQRYGWCPRPDWVRVVPDVLKGMEVVVEFLTRPESPVALPVPAYMPFFDVLHVTGRQRVEVPM-VQQDSGRYLLDLDALQAAFVRGAGSV-IICNPNNPLGTAFTEAELRAIVDIAARHGARVIADEIWAPVVYGSR-HVAAASVSEAAAEVVVTLVSASKGWNLPGLMCAQVILSNR--RDAHDWDRINMLHRMGAST---VGIRANIAAYHHGESWLDELLPYLRANRDHLARALPELAPGVEVNAPDGTYLSWVDFRALALPSEPAEY-LLSKAKVALSPGIPFGAAVGSGFARLNFATTRAILDRAIEAIAAALRDIID |
| 1D2F Chain:A ((30-389)) | ----------------------------LLPFTISDMDFATAPCIIEALNQRLMHGVFGYSRWKNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELIRQWSETGEGVVIHTPAYDAFYKA--IEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWAL---LTSGSKSFNIPALTGAYGIIENSSSRDAY---LSALKGRDGLSSPSVLALTAHIAAYQQGAPWLDALRIYLKDNLTYIADKMNAAFPELNWQIPQSTYLAWLDLRPLNIDDNALQKALIEQEKVAIMPGYTYGEE-GRGFVRLNAGCPRSKLEKGVAGLINAIRAV-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1D2F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -241553 for 2916 contacts (-82.8/contact) +
2D Compatibility (PS) -38556 + (NN) -21695 + (LL) 2520
1D Compatibility (HY) -26800 + (ID) 5350
Total energy: -331434.0 ( -113.66 by residue)
QMean score : 0.438
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