Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVYKHAPSRVRLRQTRSTVVKGRSGSLSWRRVRTGDLGLAVWGGREEYRAVKPGTPGIQPKGDMMTVTVVDAGPGRVSRSVEVAAPAAELFAIVADPRRHRELDGSGTVRGNIKVPAKLVVGSKFSTKMKLFGLPYRITSRVTALKPNELVEWSH---P-LGHRWRWEFESLSP-TLTRVTETFDYHAAGAIKNGLKFYEMTGFAKSNAAGIEATLAKLSDQYARGRA |
| 3GGN Chain:A ((3-146)) | ---------------------------------------------------------------------------TVVRDAVTIGKPAEQLYAVWRDLPGLPLLMTH--LRSVEVLDD---KRSRWTVEAPAPLGTVSWEAELTADEPGKRIAWRSLPGARIENSGEVLFRPAPGARGTEVVVRLTYR-------------------EPSQQLRDDLMRFKREQELG-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GGN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -19339 for 865 contacts (-22.4/contact) +
2D Compatibility (PS) -13373 + (NN) -4188 + (LL) 5596
1D Compatibility (HY) -5200 + (ID) 1000
Total energy: -37504.0 ( -43.36 by residue)
QMean score : 0.505
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