Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTLKVKGEGLGAQVTGVD-PKNLDDITTDEIRDIVYTNKLVVLKDVHPSPREFIKLGRIIGQIVPYYEPMY-HHEDHPEIFVSSTEEGQGVPKTGAFWHIDYMFMPEPFAFSMVLPLAVPGHDRGTYFIDLARVWQSLPAAKRDPARGTVSTHDPRRHIKIRPSDVYRPIGEV---WDEINRTTPPIKWPTVIRHPKTGQEILYICATGTTKIEDKDGNPVDPEVLQELMAATGQLDPEYQSPFIHTQHYQVGDIILWDNRVLMHRAKHGSAAGTLTTYRLTMLDGLKTPGYAA |
| 1OTJ Chain:A ((11-274)) | ------GPYIGAQISGADLTRPLSDNQFEQLYHAVLRHQVVFLRDQAITPQQQRALAQRFGEL--HIHPVYPHAEGVDEIIVLDTHNDN--PPDNDNWHTDVTFIETPPAGAILAAKELPSTGGDTLWTSGIAAYEALSVPFRQLLSGLRAEHDFRKSF---PEYKYRKTEEEHQRWREAVAKNPPLLHPVVRTHPVSGKQALFVNEGFTTRIVDVSEK--ESEALLSFLFA-HITKPEFQVRW----RWQPNDIAIWDNRVTQHYANADYLPQRRIMHRATIL---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OTJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -126699 for 2116 contacts (-59.9/contact) +
2D Compatibility (PS) -27833 + (NN) -12345 + (LL) 1832
1D Compatibility (HY) -6000 + (ID) 3750
Total energy: -174795.0 ( -82.61 by residue)
QMean score : 0.499
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