Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSHTDLTPCTRVLASSGTVPIAEELLARVLEPYSCKGCRYLIDAQYSATEDSVLAYGNFTIGESAYIRSTGHFNAVELILCFNQLAYSAFAPAVLNEEIRVLRGWSIDDYCQHQLSSMLIRKASSRFRKPLN-PQKFSARLLCRDLQVIERTWRYLKVPCVIEFWDENGG--AASGEIELAALNIP |
| 3R87 Chain:A ((53-114)) | -------------------------------------------------------------------------------------------------------------------LGFAVYKANMIFQDGVEFAEICDIRTSFTLDGK-----Y--KTLWRQEVWRPGASRAAVIGDIEMVCLD-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3R87.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -12798 for 320 contacts (-40.0/contact) +
2D Compatibility (PS) -6224 + (NN) 586 + (LL) 9452
1D Compatibility (HY) -1600 + (ID) 600
Total energy: -11184.0 ( -34.95 by residue)
QMean score : 0.258
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