Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRDRILAAVCDVLYIDEADLIDGDETDLRDLGLDSVRFVLLMKQL---GVNRQSELPSRLAANPSIAGWLRELEAVCTEFG
4IZ6 Chain:A ((566-633))
--AALREVILPLLDES-DEPF--DDDNLIDYGLDSVRMMALAARWRKVHGD--IDFV-MLAKNPTIDAWWKLLSRE-----
General information:
TITO was launched using:
RESULT:
Template:
4IZ6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39165 for 398 contacts (-98.4/contact) +
2D Compatibility (PS) -7150 + (NN) -5041 + (LL) 528
1D Compatibility (HY) -4800 + (ID) 900
Total energy: -56528.0 ( -142.03 by residue)
QMean score : 0.475
(partial model without unconserved sides chains):
PDB file :
Tito_4IZ6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4IZ6-query.scw
PDB file :
Tito_Scwrl_4IZ6.pdb
: