Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRTFESVADLAAAAGEKVGQSDWVTITQEEVNLFADATGDHQWIHVDPERAAAGPFGTTIAHGFMTLALLP----RLQHQMYTVKGVKLAINYGLNKVRFPAPVPVGSRVRATSSLVGVEDLGNGTVQATVSTTVEVEGSAKPACVAESIVRYVA
3K67 Chain:A ((48-155))
-------------------------LCEIDVAMFGLISGDLNPVHFDEDFASKTRFGGRVVHGMLTTSLVSAAVARLPGTVVLLE----------QSFRYTSPVRIGDVVRVEGVVSGVE---------KNRYTIDVKCYTGDKVVAEGVVK---
General information:
TITO was launched using:
RESULT:
Template:
3K67.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39332 for 684 contacts (-57.5/contact) +
2D Compatibility (PS) -10897 + (NN) 917 + (LL) 3248
1D Compatibility (HY) -10000 + (ID) 1500
Total energy: -57564.0 ( -84.16 by residue)
QMean score : 0.286
(partial model without unconserved sides chains):
PDB file :
Tito_3K67.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3K67-query.scw
PDB file :
Tito_Scwrl_3K67.pdb
: