Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNAPKLVIGANGFLGSHVTRQLVADCAPQKGEVRAMVRPAANTRSIDDLPLT-RF---HGDVFDTATVAEAMAGC--DDVYYCVVDTRA--WLRDPSPLFRTNVAGLRNVLDVATDASLRRFVFTSSYATVGR------RRGHVATEE--------DRVDTRKV-------------TPYVRSRVAAEDLVLQYAHDAGLPAVAMCVSTTYGGGDWGRTPHGAFIAGAVFGR-LPFTMRGIRL-EAVGVDDAARALILAAERGRNGERYLI--SERMMPLQEVVRIAADEAGVPPPRWSISVPVLYALGALGSLRARLTGKDTELSLASVRMMRSEADVDHGKAVRELGWQPRPVEES-IREAARFWAAMRTVGKDPAAS |
| 1KEU Chain:A ((4-336)) | -----LITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTY-AGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVA-----RKY-----WSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYV--------ADRPGHDRRYA------------IDAGKISRELGWKPLETFESGIRKTVEWYLA----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KEU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -111103 for 2313 contacts (-48.0/contact) +
2D Compatibility (PS) -31773 + (NN) -14412 + (LL) 2776
1D Compatibility (HY) -16000 + (ID) 4250
Total energy: -174762.0 ( -75.56 by residue)
QMean score : 0.431
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