Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKACVVKELSGPSGM-VYTDIDEVSGDGGKVVIDVRAAGVCFPDLLLTKGEYQLKLTPPFVPGMETAGVVRSAPSDAG-FHVGERV-SAFGVLGGYAEQIAVPVANVVRSPVELDDAGAVSLLVNYNTMYFALARRAALRPGDTVLVLGAAGGVGTAAVQIAKAMQAGKVIAMVHREGAIDYVASLGADVVLPLTE-GWAQQVRDHTYGQGVDIVVDPIGGPTFDDALGVLAIDGKLLLIGFAAGAVPTLKVN--RLLVRNISVVGVGWGEYLNAVPGSAALFAWGLNQLVFLG-LRPPPPQRYPLSEAQAALQSLDDG-GVLGKVVLEP |
| 1YB5 Chain:A ((30-349)) | MRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVV----GSRGTIEINPRDTMAKESSIIGVTL---FSSTKEEFQQYAAALQAGMEIGWLKPVIGSQYPLEKVAEAHENIIHGSGATGKMIL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YB5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -271286 for 2788 contacts (-97.3/contact) +
2D Compatibility (PS) -33516 + (NN) -8698 + (LL) 64
1D Compatibility (HY) -14400 + (ID) 4600
Total energy: -332436.0 ( -119.24 by residue)
QMean score : 0.484
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