Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MANSLLDFVISLVRDPEAAARYAANPERSIAEAHLTDVTRADVNSLIPVVSDSLSMSEPIGAAGGAHAGDRGNVWASGAATAALDAFAPHADAGVVQQHGAVGSVLNQPTPPGPGVTPTDPRPFRAGPHETSALLTSAEIPDTTSEDGGLPTDHPAVWNHPVVDPHTVEPDHHGYDIHG |
3A8G Chain:A ((64-86)) | -----------AWTDPEFRQLLLTDGTAAVAQYGYL----------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3A8G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -1190 for 108 contacts (-11.0/contact) +
2D Compatibility (PS) -2465 + (NN) 194 + (LL) 5296
1D Compatibility (HY) -800 + (ID) 200
Total energy: 835.0 ( 7.73 by residue)
QMean score : 0.644
|
|
|