Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVNKSRMMPAVLAVAVVVAFLTTGCIRWSTQSRPVVNGPAAAEFAVALRNRVSTDAMMAHLSKLQDIANANDGTRAVGTPGYQASVDYVVNTLRNSGFDVQTPEFSARVFKAEKGVVTLGGNTVEARALEYSLGTPPDGVTGPLVAAPADDSPGCSPSDYDRLPVSGAVVLVDRGVCPFAQKEDAAAQRGAVALIIADNIDEQAMGGTLGANTDVKIPVVSVTKSVGFQLRGQSGPTTVKLTASTQSFKARNVIAQTKTGSSANVVMAGAHLDSVPEGPGINDNGSGVAAVLETAVQLGNSPHVSNA-VRFAFWGAEEFGLIGSRNYVESLDIDALKGIALYLNFDMLASPNPGYFTYDGDQSLPLDARGQPVVPEGSAGIERTFVAYLK-MAGKTAQDTSFDGRSDYDGFTLAGIPSGGLFSGAEVKKSAEQAELWGGTADEPFDPNYHQKTDTLDHIDRTALGINGAGVAYAVGLYAQDLGGPNGVPVMADRTRHLIAKP
1TKF Chain:A ((66-277))-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NLIANWPGGDPNKVLMAGAHLDSVSSGAGINDNGSGSAAVLETALAVSRAGYQPDKHLRFAWWGAEELGLIGSKFYVNNLPSADRSKLAGYLNFDMIGSPNPGYFVYDDD----------PV-------IEKTFKNYFAGLNVPTEIE----GRSDHAPFKNVGVPVGGLFTGAGYTKSAAQAQKWGGTAGQAFDRCYHSSCDSLSNINDTALDRNSDAAAHAIWTLSS----------------------


General information:
TITO was launched using:
RESULT:

Template: 1TKF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50204 for 1787 contacts (-28.1/contact) +
2D Compatibility (PS) -21944 + (NN) -10772 + (LL) 15932
1D Compatibility (HY) -14800 + (ID) 5350
Total energy: -87138.0 ( -48.76 by residue)
QMean score : 0.433

(partial model without unconserved sides chains):
PDB file : Tito_1TKF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1TKF-query.scw
PDB file : Tito_Scwrl_1TKF.pdb: