Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANTGSLVLLRHGESDWNALNLFTGWVDVGLTDKGQAEAVRSGELIAEHDLLPDVLYTSLLRRAITTAHLALDSADRLWIPVRRSWRLNERHYGALQGLDKAETKARYGEEQFMAWRRSYDTPPPPIERGSQFSQDADPR--YADIGGGPLTECLADVVARFLPYFTDVIVGDLRVGKTVLIVAHGNSLRALVKHLDQMSDDEIVGLNIPTGIPLRYDLDSAMRPLVRGGTYLDPEAAAAGAAAVAGQGRG
1QHF Chain:A ((2-240))
-----KLVLVRHGQSEWNEKNLFTGWVDVKLSAKGQQEAARAGELLKEKKVYPDVLYTSKLSRAIQTANIALEKADRLWIPVNRSWRLNERHYGDLQGKDKAETLKKFGEEKFNTYRRSFDVPPPPIDASSPFSQKGDERYKYVDPNVLPETESLALVIDRLLPYWQDVIAKDLLSGKTVMIAAHGNSLRGLVKHLEGISDADIAKLNIPTGIPLVFELDENLKP-SKPSYYLDPEAAAAGAAAV------
General information:
TITO was launched using:
RESULT:
Template:
1QHF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -95196 for 1964 contacts (-48.5/contact) +
2D Compatibility (PS) -25940 + (NN) -18071 + (LL) 176
1D Compatibility (HY) -21200 + (ID) 7650
Total energy: -167881.0 ( -85.48 by residue)
QMean score : 0.451
(partial model without unconserved sides chains):
PDB file :
Tito_1QHF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QHF-query.scw
PDB file :
Tito_Scwrl_1QHF.pdb
: