Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ---------------------------------------------------------------------------MGSVI-KKRRKRMSKKKHRKLLRR--TRVQ-RRKLGK-------------------------------------------------------------------------------------------------------------------------------------------------- |
3U4T Chain:A ((230-487)) | VEFRYADFLFKNNNYAEAIEVFNKLEAKKYNSPYIYNRRAVCYYELAKYDLAQKDIETYFSKVNATKAKSADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTDPKVFYELGQAYYYNKEYVKADSSFVKVLELKPNIYIGYLWRARANAAQDPDTKQGLAKPYYEKLIEVCAPGGAKYKDELIEANEYIAYYYTINRDKVKADAAWKNILALDPTNKKAIDGLK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3U4T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 19005 for 170 contacts (111.8/contact) +
2D Compatibility (PS) -3396 + (NN) -1360 + (LL) 0
1D Compatibility (HY) 0 + (ID) 150
Total energy: 14099.0 ( 82.94 by residue)
QMean score : 0.298
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