Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDPVSYTRKDSIAVISMDDGKVNALGPAMQQALNAAIDNADRDDVGALVITGNGRVFSGGFDLKILTSGEVQPAIDMLRGGFELAYRLLSYPKPVVMACTGHAIAMGAFLLSCGDHRVA-AHAYNIQANEVAIGMTIPYAALEIMKLRLTRSAYQQATGLAKTFFGETALAAGFIDEIALPEVVVSRAEEAAREFAGLNQHAHAATKLRSRADALTAIRAGIDGIAAEFGL
3OT6 Chain:A ((5-225))
-SDLVSYHLDDGVATLTLNNGKVNAISPDVIIAFNAALDQAEKDR-AIVIVTGQPGILSGGYDLKVMTS-SAEAAINLVAQGSTLARRMLSHPFPIIVACPGHAVAKGAFLLLSADYRIGVAGPFSIGLNEVQIGMTMHHAGIELARDRLRKSAFNRSVINAEMFDPEGAMAAGFLDKVVSVEELQGAALAVAAQLKKINMNAHKKTKLKVRKGLLDTLDAAIE--------
General information:
TITO was launched using:
RESULT:
Template:
3OT6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -162945 for 1895 contacts (-86.0/contact) +
2D Compatibility (PS) -24595 + (NN) -13043 + (LL) 788
1D Compatibility (HY) -16400 + (ID) 4500
Total energy: -220695.0 ( -116.46 by residue)
QMean score : 0.563
(partial model without unconserved sides chains):
PDB file :
Tito_3OT6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OT6-query.scw
PDB file :
Tito_Scwrl_3OT6.pdb
: