Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MARCDVLVSADWAESNLHAPKVVFVEVDEDTSAYDRDHIAGAIKLD-WRTDL-QDPVKRDFVDAQQFSKLLSERGIANEDTVILYGGNNNWFAAYAYWYFKLYGHEKVKLLDGGRKKWELDGRPLSSD---PVSRPVTSYTASPPDNTIRAFRDEVLAAINVKNLI--DVRSPDEFSG-KILAPAHLPQEQSQRPGHIPGAINVPWSRAANEDGTFKSDEELAKLYADAGLDNSKETIAYCRIGERSSHTWFVLRELLGHQNVKNYDGSWTEYGSLVGAPIELGS |
| 1H4M Chain:X ((17-271)) | -------------QARLSAPELILVDLT-SAARYAEGHIPGARFVDPKRTQLGQPPAPGLQPPREQLESLFGELGHRPEAVYVVYDDEGGGWAGRFIWLLDVIGQQRYHYLNGGLTAWLAEDRPLSRELPAPAGGPVALSLHDEPT----ASRDYLLGRLGAADLAIWDARSPQEYRGEKVLA---------AKGGHIPGAVNFEWTAAMDPSRALRIRTDIAGRLEELGITPDKEIVTHCQTHHRSGLTYLIAKA-LGYPRVKGYAGSWGEWGNHPDTPVEL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1H4M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -63168 for 2057 contacts (-30.7/contact) +
2D Compatibility (PS) -27141 + (NN) -20022 + (LL) 2088
1D Compatibility (HY) -14400 + (ID) 4000
Total energy: -126643.0 ( -61.57 by residue)
QMean score : 0.402
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