Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MARASGASDYRSGELSHQDERGAAHMVDITEKATTKRTAVAAGILRTSAQVVALISTGGLPKGDALATARVAGIMAAKRTSDLIPLCHQLALTGVDVDFTVGQ----LDIEITATVRSTDRTGVEMEALTAVSVAALTLYDMIKAVDPGALIDDIRVLHKEGGRRGTWTRR
2EEY Chain:A ((4-160))
--------------FTHFNEQGRAKMVDITHKEDTVRVAVAQTSVTVSREIYEKMTSNAIEKGDVLAVAQVAGVMAAKKTADLIPMCHPLMLKGVDIAFAWENDGEAHKLVITATVKTKGSTGVEMEALTAASVCALTVYDMCKALDKGMVIGPTYLVEKTGGKSGHYRRK
General information:
TITO was launched using:
RESULT:
Template:
2EEY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -80487 for 1136 contacts (-70.9/contact) +
2D Compatibility (PS) -16583 + (NN) -8299 + (LL) 532
1D Compatibility (HY) -14800 + (ID) 3750
Total energy: -123387.0 ( -108.62 by residue)
QMean score : 0.429
(partial model without unconserved sides chains):
PDB file :
Tito_2EEY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2EEY-query.scw
PDB file :
Tito_Scwrl_2EEY.pdb
: