Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLDSDARLASDLSLAVMRLSRQLRFRNPSSPVSLSQLSALTTLANEGAMTPGALAIRERVRPPSMTRVIASLADMGFVDRAPHPIDGRQVLVSVSESGAELVKAARRARQEWLAERLATLNRSERDILRSAADLMLALVDESP
4RGX Chain:A ((44-129))
-------------------------------ISLPQFTALSVLAAKPNLSNAKLAERSFIKPQSANKILQDLLANGWIEKAPDPTHGRRILVTVTPSGLDKLNQCNQVVQQLEAQML--------------------------
General information:
TITO was launched using:
RESULT:
Template:
4RGX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47543 for 562 contacts (-84.6/contact) +
2D Compatibility (PS) -9503 + (NN) -5648 + (LL) 4180
1D Compatibility (HY) -5600 + (ID) 1350
Total energy: -65464.0 ( -116.48 by residue)
QMean score : 0.531
(partial model without unconserved sides chains):
PDB file :
Tito_4RGX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4RGX-query.scw
PDB file :
Tito_Scwrl_4RGX.pdb
: