Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLRRMGDASLTTELGRVLVTGGAGFVGANLVTTLLDRGH-------------WVRSFDRAPSLLP--AHPQLEVLQGDITDADVCAAAVDGIDTIFHTAA---IIELMGGASVTDEYRQRSFAVNVGGTENLLHAGQRAGVQRFVYTSSNSVVMGGQNIAGGDETLPYTDRFNDLYTETKVVAERFVLAQNGVDGMLTCAIRPSGIWG--NGDQTMFRKLFESVLKGHVKVLVGRKSARLDNSYVHNLIHGFILAAAHLVPDGTAPGQAYFINDAEPINMFEFARPVLEACGQRWPKMRISGPAVRWVMTGWQRLHFRFGFPAPLLEPLAVERLYLDNYFSIAKARRDLGYEPLFTTQQALTECLPYYVSLFEQMKNEARAEKTAATVKP |
1R6D Chain:A ((2-269)) | ---------------RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRA-NLAPVDADPRLRFVHGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTE-------TNVQGTQTLLQCAVDAGVGRVVHVSTNQVY---GSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANV--REWVHTDDHCRGIA---LVLAGGRAGEIYHIGGGLELTNRELTGILLDSLGADWSSVR------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R6D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -108515 for 1938 contacts (-56.0/contact) +
2D Compatibility (PS) -26823 + (NN) -14454 + (LL) 9100
1D Compatibility (HY) -12000 + (ID) 4000
Total energy: -156692.0 ( -80.85 by residue)
QMean score : 0.363
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