Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTYTIAEPCVDIKDKACIEECPVDCIYEGARMLYIHPDECVDCGACEPVCPVEAIFYEDDVPEQWSHYTQINADFFAELGSPGGAAKVGMTENDPQAVKDLAPQSEDA
1FRJ Chain:A ((2-74))
--FVVTDNCIKCKYTDCVEVCPVDCIYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDEVPEDMQEFIQLNAEL---------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1FRJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -62932 for 513 contacts (-122.7/contact) +
2D Compatibility (PS) -7361 + (NN) -5715 + (LL) 1460
1D Compatibility (HY) -10000 + (ID) 1900
Total energy: -86448.0 ( -168.51 by residue)
QMean score : 0.485
(partial model without unconserved sides chains):
PDB file :
Tito_1FRJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FRJ-query.scw
PDB file :
Tito_Scwrl_1FRJ.pdb
: