Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRTTLTLDDDVVRLVEDAVHRERRPMKQVINDALRRALAPPVKRQEQY-RLEPHESAVRSGLDLAGFNKLADELEDEALLDATRRAR
2WJF Chain:A ((102-166))
-----TLNDSRYALIEFSMNTPYRDIHSALSKILMLGITPVIAHIERYDALENNEKRVRELIDMGCYTQV-----------------
General information:
TITO was launched using:
RESULT:
Template:
2WJF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1289 for 393 contacts (-3.3/contact) +
2D Compatibility (PS) -6424 + (NN) -404 + (LL) 2128
1D Compatibility (HY) -6000 + (ID) 800
Total energy: -12789.0 ( -32.54 by residue)
QMean score : 0.206
(partial model without unconserved sides chains):
PDB file :
Tito_2WJF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WJF-query.scw
PDB file :
Tito_Scwrl_2WJF.pdb
: