Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHDDFERCYRAIQSKDARFDGWFVVAVLTTGVYCRPSCPVRPPFARNVRFLPTAAAAQGEGFRACKRCRPDASPGSPEWNVRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERLLQAVVGAGPLALARAQRMQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPTALRARAAARFESATASAGTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTLRLPWGNGIVSLTPAPDHVRCLLVLDDFRDLMTATARC----RRLLDLDADPEAIVEALGADPDLRAVVGKA-PGQRIPRTVDEAEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTHTFPSIEQLAEIDP---GHLAVPKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVGPWTAEVIAMRGLGDPDAFPASDLGLRLAAKKLGLPAQRRALTVHSARWRPWRSYATQHLWTTLEHPVNQWPPQEKIA |
| 3CVS Chain:A ((9-281)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PYDWSWMLGFLAARAVSSVETVADSYYARSLAVGEYRGVV--TAIPDIARHTLHINLSAGLEPVAAECLAKMSRLFDLQCNPQIVNGALGR-------LGAARPGLRLPGCVDAFEQGVRAILGQLVSVAMAAKLTARVAQLYGERLDDFPEYI--CFPTPQRLAAADPQALKALGMPLKRAEALIHLANAALEGTLPMTIPGDVEQAMKTLQTFPGIGRWTANYFALRGWQAKDVFLPDDYLIKQRFPGM-TPAQIRR---YAERWKPWRSYALLHIWYT-----EGWQPDE--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CVS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -103361 for 2083 contacts (-49.6/contact) +
2D Compatibility (PS) -28487 + (NN) -18704 + (LL) 16020
1D Compatibility (HY) -16400 + (ID) 4800
Total energy: -155732.0 ( -74.76 by residue)
QMean score : 0.433
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