Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMPDYHALIVGAGFSGIGAAIKLDRAGFSDYLVVEAGDGVGGTWHWNTYPGIAVDIPSFSYQFSFE----QSRHWSRTYAPGHELKAYAEHCVDKYGIRSRIRLNTKVLAAEFDDEHSLWRVQTDPGGEITARFLISACGILTVPKLPDIDGVDSFEGVTMHTARWDHTQDLTGKRVGIIGTGASAVQVIPEMAPIVSHLTVFQRTPIWCFPKFDVPLPTAVRWAMRIPGGKAVHRLLSQA----FVEATFPIAA---------------------HYFAVFPLAKHMESAG-------RRYLRQQVHDPVVREQLTPRYAVGCKRPGFHNTYLSTFNRDNVRLVT---EPIDKITPTAVATTDGASHEIDVLVLATGFKVLDTDSIPTYAVTGTGGASLSRFWDEHRLQAYEGVSVPGYPNFFTVFGPYGYVGSSYFALIETQAHHIIRCLKRARRTGATRIEVTEEANARYFAEVMRRRHRQVFWQDSC-RLANSYYFDKNGDVPLRPTTTVEAYWRSRRFDLGDYRISS |
| 3GWD Chain:A ((11-488)) | ------AVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLSAINFPNLPGLDTFEGETIHTAAWPEGKSLAGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQYSVPVGNRPVNPEQIAEIKADYDRIWERAKNSAVAFGFEESTLPAMSVSEEERNRIFQEAWDHGGGFRFMFGTFGDIATDEAANEAAASFIRAKVAEIIEDPETARKLMPK-GLFAKRPLCDSGYYEVYNRPNVEAVAIKENPIREVTAKGVVTEDGVLHELDVLVFATGFDAVDGN-YRRIEIRGRDGLHINDHWD-GQPTSYLGVSTANFPNWFMVLGPNGPF-TNLPPSIETQVEWISDTIGYAERNGVRAIEPTPEAEAE--------------WTETCTEIANATLFTK------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GWD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -271479 for 3573 contacts (-76.0/contact) +
2D Compatibility (PS) -46477 + (NN) -10767 + (LL) 3392
1D Compatibility (HY) -24400 + (ID) 8200
Total energy: -357931.0 ( -100.18 by residue)
QMean score : 0.469
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