Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTVVPGAPSRPASAVSRPSYRQCVQASAQTSARRYSFPSYRRPPAEKLVFPVLLGILTLLLSACQTASASGYNEPRGYDRATLKLVFSMDLGMCLNRFTYDSKLAPSRPQVVACDSREARIRNDGFHANAPSCMRIDYELITQNHRAYYCLKYLVRVGYCYPAVTTPGKPPSVLLYAPSACDESLPSPRVATAL-----VPGTRSANREFSRFVVTEIKSLGAGGRCDSASVSLQPPEEIEGPAIPPASSQLVCVAPK |
4I3S Chain:L ((38-119)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------PGQPPKLLIFATSKRASGIPDRFSGSQFGKQYTLTITRMEPEDFARYYCQQLEFFGQGTRLEIRRTVAAPSVFI----FPPSDEQL------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4I3S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -10036 for 322 contacts (-31.2/contact) +
2D Compatibility (PS) -8203 + (NN) -5321 + (LL) 11104
1D Compatibility (HY) -5200 + (ID) 1050
Total energy: -18706.0 ( -58.09 by residue)
QMean score : 0.262
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