Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNLGDLTNFVEKPLAAVSNIVNTPNSAGRYRPFYLRNLLDAVQGRNLNDAVKGKVVLITGGSSGIGAAAAKKIAEAGGTVVLVARTLENLENVANDIRAIRGNGGTAHVYPCDLSDMDAIAVMADQVLGDLGGVDILINNAGRSIRRSLELSYDRIHDYQRTMQLNYLGAVQLILKFIPGMRER-HFGHIVNVSSVGVQTRAPRFGA-YIASKAALDSLCDALQAETVHDNVRFTTVHMALVRTPMISPTTIYDKFPTLTPDQAAGVITDAIVHRPRRASSPFGQFAAVADAVNPAVMDRV-RNRAFNMFGDSSAAKGSESQTDTSELDKRSETFVRATRGIHW |
| 4YAE Chain:A ((3-271)) | --------------------------------------------------IAGTTAFITGGASGIGFGIAQRLLANGARLVLADIRQDHLDE-ARQFFEERQQGRNVHTIRLDVSDRAQMAEAARECEAVMGGPDILINNAG--IDPSGPFKDATYQDWDYGLAINLMGPINGIMAFTPGMRARGRGGHIVNTASLAGLTPMPSFMAIYATAKAAVITLTETIRDSMAEDNIGVTVLMPGPI----------------MEPTEVGDMIVDAIVHNKLYVST-HGNWRETCEARFQALLDSMP------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YAE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -142342 for 1929 contacts (-73.8/contact) +
2D Compatibility (PS) -25615 + (NN) -12556 + (LL) 5316
1D Compatibility (HY) -10800 + (ID) 3750
Total energy: -189747.0 ( -98.37 by residue)
QMean score : 0.520
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