Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTTQTAKASRRARIERRTRESDIVIELDLDGTGQVAVDTGVPFYDHMLTALGSHASFDLTVRATGDVEIEAHHTIEDTAIALGTALGQALGDKRGIRRFGDAFIPMDETLAHAAVDLSGRPYCVHTGEPDHLQHTTIAGSSVPYHTVINRHVFESLAANARIALHVRVLYGRDPHHITEAQYKAVARALRQAVEPDPRVSGVPSTKGAL
4MU0 Chain:A ((7-191))
--------SARIGEVKRETKETNVSVKINLDGHGVSDSSTGIPFLDHMLDQLASHGLFDVHVRATGDTHIDDHHTNEDVALAIGTALLKALGERKGINRFGDFTAPLDEALIHVSLDLSGRPYLGYNLEIP----TQRVGT---YDTQLVEHFFQSLVNTSGMTLHIRQLAGKNSHHIIEATFKAFARALRQATESDPRR----------
General information:
TITO was launched using:
RESULT:
Template:
4MU0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -131283 for 1591 contacts (-82.5/contact) +
2D Compatibility (PS) -19660 + (NN) -6782 + (LL) 1240
1D Compatibility (HY) -10400 + (ID) 4600
Total energy: -171485.0 ( -107.78 by residue)
QMean score : 0.521
(partial model without unconserved sides chains):
PDB file :
Tito_4MU0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MU0-query.scw
PDB file :
Tito_Scwrl_4MU0.pdb
: